Package index • anndataR

All functions

AbstractAnnData: Abstract AnnData class

AnnData-usage: AnnData structure and usage

AnnData(): Create an in-memory AnnData object.

HDF5AnnData: HDF5AnnData

InMemoryAnnData: InMemoryAnnData

as_AnnData(): Convert to an AnnData object

from_Seurat() deprecated: Convert a Seurat object to an AnnData object

from_SingleCellExperiment() deprecated: Convert a SingleCellExperiment object to an AnnData object

generate_dataset(): Generate a dataset

read_h5ad(): Read H5AD

to_Seurat() deprecated: Convert an AnnData object to a Seurat object

to_SingleCellExperiment() deprecated: Convert an AnnData object to a SingleCellExperiment object

write_h5ad(): Write H5AD